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ORPHA:99329Malformation syndrome
What it is
A rare Y chromosome number anomaly that affects only males and is characterized by mild-moderate developmental delay (especially speech), normal to mild intellectual disability, large, irregular teeth with poor enamel, tall stature and acne. Radioulnar synostosis and clinodactyly have also been associated. Boys generally present normal genitalia, while hypogonadism and infertility is frequently reported in adult males.
Key facts
- Prevalence
- <1 / 1 000 000
- Age of onset
- Antenatal, Infancy, Neonatal
- Classified as
- Malformation syndrome
Prevalence figures describe populations, not individuals, and are often estimates from a single study. Where the figure is an incidence or a birth prevalence, it says so.
Signs and symptoms
Very common80–99%
31- Abnormal dermatoglyphics
- Abnormal foot morphology
- Abnormal renal morphology
- Acne
- Aggressive behavior
- Asthma
- Atypical behavior
- Azoospermia
- Delayed speech and language development
- Depressed nasal bridge
- Dislocated radial head
- Enamel hypoplasia
- Epicanthus
- Feeding difficulties
- Global developmental delay
- High palate
- Hypertelorism
- Impulsivity
- Intellectual disability
- Intellectual disability, mild
- Irregularly spaced teeth
- Long philtrum
- Low frustration tolerance
- Male hypogonadism
- Pes planus
- Primary gonadal insufficiency
- Radioulnar synostosis
- Recurrent upper respiratory tract infections
- Short neck
- Tall stature
- Thick lower lip vermilion
These ranges are how often a sign appears across everyone diagnosed, not a prediction for one person — most people have some of these and not others. Orphanet also records findings that are specifically absent in this disease; those are in the data but not listed here.
ICD-10 codes
ICD-10 has no distinct code for most rare diseases, so many are filed under the nearest available one. A shared code identifies the group, not this disease — the ORPHAcode above is what identifies it.
Related health topics
Reached through the ICD-10 categories this disease is filed under, so these describe the broader group rather than this disease specifically.
Cross-references
Orphadata Science: Free access data from Orphanet. © INSERM 1999. Data version 2026-06-23. Available under CC BY 4.0. This is a reference, not medical advice.
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