46,XY complete gonadal dysgenesis

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46,XY complete gonadal dysgenesis

ORPHA:242Malformation syndrome

Also called 46,XY CGD · 46,XY pure gonadal dysgenesis · Swyer syndrome

What it is

A rare disorder/difference of sex development (DSD) associated with absence in gonadal development that results in the presence of female appearing external and internal genitalia in presence of a 46,XY karyotype.

Key facts

Age of onset
Adolescent, Adult
Inheritance
Autosomal dominant, Autosomal recessive, X-linked recessive, Y-linked
Classified as
Malformation syndrome

Signs and symptoms

These ranges are how often a sign appears across everyone diagnosed, not a prediction for one person — most people have some of these and not others. Orphanet also records findings that are specifically absent in this disease; those are in the data but not listed here.

Genes

CBX2Disease-causing germline mutation(s) (loss of function)
DHHDisease-causing germline mutation(s)
DHX37Disease-causing germline mutation(s)
MAP3K1Disease-causing germline mutation(s)
NR0B1Disease-causing germline mutation(s)
NR5A1Disease-causing germline mutation(s)
SOX9Disease-causing germline mutation(s)
SRYDisease-causing germline mutation(s) (loss of function)
DMRT1Role in the phenotype of
WT1Candidate gene tested

ICD-10 codes

Q99.1filed under a broader ICD-10 category — shared with 3 other rare diseases

ICD-10 has no distinct code for most rare diseases, so many are filed under the nearest available one. A shared code identifies the group, not this disease — the ORPHAcode above is what identifies it.

Related health topics

Reached through the ICD-10 categories this disease is filed under, so these describe the broader group rather than this disease specifically.

Cross-references

GARD 5068MEDDRA 10084327MONDO 0010765OMIM 154230OMIM 233420OMIM 300018OMIM 400044OMIM 612965OMIM 613080OMIM 613762OMIM 616425UMLS C2936694

Orphadata Science: Free access data from Orphanet. © INSERM 1999. Data version 2026-06-23. Available under CC BY 4.0. This is a reference, not medical advice.

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